Friday March 27, 2026, 9:00AM-4:00PM (Virtual)
[FAS Informatics Group] Join us for a full day hands-on workshop on how to use the open source software OMERO for your image analysis and data management needs. Although not required, participants may want to have the OMERO.insight app installed and/or the OMERO plugin for FIJI. Follow the links for installation instructions.Join us for a full day hands-on workshop on how to use the open source software OMERO for your image analysis and data management needs. Although not required, participants may want to have the OMERO.insight app installed and/or the OMERO plugin for FIJI. Follow the links for installation instructions.
| Time | Topic |
|---|---|
| 9:00 – 10:30 | Importing into OMERO |
| 10:30 – 10:45 | Break |
| 10:45 – 12:00 | OMERO core concepts I - Data management - Metadata, Users and groups |
| 12:00 – 1:00 | Lunch |
| 1:00 – 2:30 | OMERO core concepts II - Viewers: OMERO.iviewer - Import of metadata (CSV import scripts) - OMERO.figure introduction |
| 2:30 – 2:45 | Break |
| 2:45 – 4:00 | OMERO.figure part II Analysis of Images in OMERO: - Analysis with 3rd party tools (principles) - QuPath and OMERO (optional) - Analysis with Fiji: manual - Analysis with Fiji: scripting |