Publications

2018
Barutcu AR, Maass PG, Lewandowski JP, Weiner CL, Rinn JL. A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus. Nature Communications [Internet]. 2018;9 (1444). Publisher's Version
Koh J, Babayan BM, Rubinstein ND, Autry AE, Marin-Rodriguez B, Kapoor V, Miyamishi K, Zweifel LS, Luo L, Uchida N, et al. Functional circuit architecture underlying parental behaviour. Nature [Internet]. 2018;556 :326-331. Publisher's Version
Wuttke TV, Markopoulos F, Padmanabhan H, Wheeler AP, Murthy VN, Macklis JD. Developmentally primed cortical neurons maintain fidelity of differentiation and establish appropriate functional connectivity after transplantation. Nature Neuroscience [Internet]. 2018;21 :517-529. Publisher's Version
Masís J, Mankus D, Wolff SBE, Guitchounts G, Joesch M, Cox DD. A micro-CT-based method for quantitative brain lesion characterization and electrode localization. Scientific Reports [Internet]. 2018;8 (5184). Publisher's Version
Hou X, Li J, Tesler AB, Yao Y, Wang M, Min L, Sheng Z, Aizenberg J. Dynamic air/liquid pockets for guiding microscale flow. Nature Communications [Internet]. 2018;9 (733). Publisher's Version
Maass PG, Barutcu AR, Weiner CL, Rinn JL. Inter-chromosomal Contact Properties in Live-Cell Imaging and in Hi-C. Molecular Cell [Internet]. 2018;69 :1039-1045. Publisher's Version
Pandey S, Shekhar K, Regev A, Schier AF. Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq. Current Biology [Internet]. 2018. Publisher's Version
Shukla CJ, McCorkindale AL, Gerhardinger C, Korthauer KD, Cabili MN, Shechner DM, Irizarry RA, Maass PG, Rinn JL. High‐throughput identification of RNA nuclear enrichment sequences. EMBO [Internet]. 2018. Publisher's Version
Maass PG, Barutcu AR, Shechner DM, Weiner CL, Melé M, Rinn JL. Spatiotemporal allele organization by allele-specific CRISPR live-cell imaging (SNP-CLING). Nature Structural and Molecular Biology [Internet]. 2018. Publisher's Version
2017
Escamilla CO, Filonova I, Walker AK, Xuan ZX, Holehonnur R, espinosa F, Liu S, Thyme SB, López-García IA, mendoza DB, et al. Kctd13 deletion reduces synaptic transmission via increased RhoA. Nature [Internet]. 2017;551 :227-231. Publisher's Version
Norris ML, Pauli A, Gagnon JA, Lord ND, Rogers KW, Mosimann C, Zon LI, Schier AF. Toddler signaling regulates mesodermal cell migration downstream of Nodal signaling. eLIFE [Internet]. 2017;6 (e22626). Publisher's Version
Gagnon JA, Obbad K, Schier AF. Zebrafish nanog is primarily required in extraembryonic tissue. Development [Internet]. 2017. Publisher's Version
Montague TG, Schier AF. Vg1-1 Nodal heterodimers are the endogenous inducers of mesendoderm. eLIFE [Internet]. 2017;6 (e28183). Publisher's Version
Rogers KW, Rogers KW, Gagnon JA, Pauli A, Zimmerman S, Aksel DC, Reyon D, Tsai SQ, Joung KJ, Schier AF. Nodal patterning without Lefty inhibitory feedback is functional but fragile. eLIFE [Internet]. 2017;6 (e28785). Publisher's Version
Cowan DB, Yao R, Thedsanamoorthy JK, Zurakowski D, del Nido PJ, McCully JD. Transit and integration of extracellular mitochondria in human heart cells. Scientific Reports [Internet]. 2017;7 (17450). Publisher's Version
Li Y, Mathis A, Grewe BF, Osterhout JA, Ahanonu B, Schnitzer MJ, Murthy VN, Dulac C. Neuronal Representation of Social Information in theMedial Amygdala of Awake Behaving Mice. Cell [Internet]. 2017;171 :1-15. Publisher's Version
Wallace JL, Wienisch M, Murthy VN. Development and Refinement of FunctionalProperties of Adult-Born Neurons. Neuron [Internet]. 2017;96 :1-14. Publisher's Version
Richardson DS, Lichtman JW. Snapshot: Tissue Clearing. Cell [Internet]. 2017;171 (2) :496-496. Publisher's Version
Smith KP, Richmond DL, Brennan-Krohn T, Elliot HL, Kirby JE. Development of MAST: A Microscopy-Based Antimicrobial Susceptibility Testing Platform. SLAS Technology [Internet]. 2017. Publisher's Version
Schoppik D, Bianco IH, Prober DA, Douglass AD, Robson DN, Li JMB, Greenwood JSF, Soucy E, Engert F, Schier AF. Gaze-stabilizing central vestibular neurons project asymmetrically toextraocular motoneuron pools. The Journal of Neuroscience [Internet]. 2017. Publisher's Version

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